| Extreme pathway lengths and reaction participation in genome-scale metabolic networks. |
J.A. Papin; N.D. Price; B.Ø. Palsson |
2002 |
| Metabolic modelling of microbes: the flux-balance approach. |
J.S. Edwards; M.W. Covert; B.Ø. Palsson |
2002 |
| The genome-scale metabolic extreme pathway structure in Haemophilus influenzae shows significant network redundancy. |
J.A. Papin; N.D. Price; J.S. Edwards; B.Ø. Palsson |
2002 |
| In silico model-driven assessment of the effects of single nucleotide polymorphisms (SNPs) on human red blood cell metabolism. |
N. Jamshidi; S.J. Wiback; B.Ø. Palsson |
2002 |
| H. influenzae Consortium: integrative study of H. influenzae-human interactions. |
E. Kolker; S. Purvine; A. Picone; T. Cherny; B.J. Akerley; R.S. Munson; B.Ø. Palsson; D.A. Daines; A.L. Smith |
2002 |
| Characterizing the metabolic phenotype: a phenotype phase plane analysis. |
J.S. Edwards; R. Ramakrishna; B.Ø. Palsson |
2002 |
| Characterization and efficacy of PKH26 as a probe to study the replication history of the human hematopoietic KG1a progenitor cell line. |
G.M. Lee; S. Fong; D.J. Oh; K. Francis; B.Ø. Palsson |
2002 |
| Determination of redundancy and systems properties of the metabolic network of Helicobacter pylori using genome-scale extreme pathway analysis. |
N.D. Price; J.A. Papin; B.Ø. Palsson |
2002 |
| Transcriptional regulation in constraints-based metabolic models of Escherichia coli. |
M.W. Covert; B.Ø. Palsson |
2002 |
| Description and analysis of metabolic connectivity and dynamics in the human red blood cell. |
K.J. Kauffman; J.D. Pajerowski; N. Jamshidi; B.Ø. Palsson; J.S. Edwards |
2002 |
| Regulation of gene expression in flux balance models of metabolism. |
M.W. Covert; C.H. Schilling; B.Ø. Palsson |
2001 |
| Flux-balance analysis of mitochondrial energy metabolism: consequences of systemic stoichiometric constraints. |
R. Ramakrishna; J.S. Edwards; A. McCulloch; B.Ø. Palsson |
2001 |
| In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data. |
J.S. Edwards; R.U. Ibarra; B.Ø. Palsson |
2001 |
| Metabolic modeling of microbial strains in silico. |
M.W. Covert; C.H. Schilling; I. Famili; J.S. Edwards; I.I. Goryanin; E. Selkov; B.Ø. Palsson |
2001 |
| Dynamic simulation of the human red blood cell metabolic network. |
N. Jamshidi; J.S. Edwards; T. Fahland; G.M. Church; B.Ø. Palsson |
2001 |
| The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities. |
J.S. Edwards; B.Ø. Palsson |
2000 |
| Extension of osmolality-induced podia is observed from fluorescently labeled hematopoietic cell lines in hyperosmotic medium. |
D.J. Oh; A.R. Martinez; G.M. Lee; K. Francis; B.Ø. Palsson |
2000 |
| Intercellular adhesion can be visualized using fluorescently labeled fibrosarcoma HT1080 cells cocultured with hematopoietic cell lines or CD34(+) enriched human mobilized peripheral blood cells. |
D.J. Oh; A.R. Martinez; G.M. Lee; K. Francis; B.Ø. Palsson |
2000 |
| Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions. |
J.S. Edwards; B.Ø. Palsson |
2000 |
| Multiple steady states in kinetic models of red cell metabolism. |
J.S. Edwards; B.Ø. Palsson |
2000 |
| Robustness analysis of the Escherichia coli metabolic network. |
J.S. Edwards; B.Ø. Palsson |
2000 |
| Combining pathway analysis with flux balance analysis for the comprehensive study of metabolic systems. |
C.H. Schilling; J.S. Edwards; D. Letscher; B.Ø. Palsson |
2000 |
| In situ labeling of adherent cells with PKH26. |
G.M. Lee; S. Fong; K. Francis; D.J. Oh; B.Ø. Palsson |
2000 |
| Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective. |
C.H. Schilling; D. Letscher; B.Ø. Palsson |
2000 |
| Assessment of the metabolic capabilities of Haemophilus influenzae Rd through a genome-scale pathway analysis. |
C.H. Schilling; B.Ø. Palsson |
2000 |
| Toward metabolic phenomics: analysis of genomic data using flux balances. |
C.H. Schilling; J.S. Edwards; B.Ø. Palsson |
1999 |
| Metabolic pathway analysis: basic concepts and scientific applications in the post-genomic era. |
C.H. Schilling; S. Schuster; B.Ø. Palsson; R. Heinrich |
1999 |
| Systems properties of the Haemophilus influenzae Rd metabolic genotype. |
J.S. Edwards; B.Ø. Palsson |
1999 |
| Phototoxicity of the fluorescent membrane dyes PKH2 and PKH26 on the human hematopoietic KG1a progenitor cell line. |
D.J. Oh; G.M. Lee; K. Francis; B.Ø. Palsson |
1999 |
| Symmetry of initial cell divisions among primitive hematopoietic progenitors is independent of ontogenic age and regulatory molecules. |
S. Huang; P. Law; K. Francis; B.Ø. Palsson; A.D. Ho |
1999 |