We have the following information available:

H. pylori iIT341 GSM/GPR

Thiele, I., Vo, T.D., Price, N.D. and Palsson, B.Ø., "An Expanded Metabolic Reconstruction of Helicobacter pylori (iIT341 GSM/GPR): An in silico genome-scale characterization of single and double deletion mutants", Journal of Bacteriology, 187(16): pp. 5818-5830 (2005).

• Supplemental Section 1

• Supplemental Table S1-S2: Metabolic network and metabolite abbreviations

• Supplemental Table S3-S4: Biomass compounds and network dead ends

• Supplemental Table S5-S6: Single gene deletion results

• Supplemental Table S7: Pathways per subsystem assignement

• Supplemental Figure S1: Metabolic map

• Exchange fluxes (Table 2B):Complete list of exchange fluxes

Microsoft Excel format of iIT341 GSM/GPR Complete list of network reactions, metabolites, and exchange fluxes

SBML version of iIT341 GSM/GPR

Model of iIT341 GSM/GPR - minimal medium I, Matlab format

H. pylori iCS291

Schilling, C. H., Covert, M.W., Famili, I., Church, G.M., Edwards, J.S., and Palsson, B.Ø., "Genome-scale metabolic model of Helicobacter pylori 26695", Journal of Bacteriology, 184(16): pp. 4582-4593 (2002).

Model in Microsoft Excel format

H pylori Others

If you have further questions about a "computational" modeling of H. pylori, please email us at ines-thiele@gmx.de.