|Title||SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.|
|Publication Type||Journal Article|
|Year of Publication||2013|
|Authors||Chaouiya C, Bérenguier D, Keating SM, Naldi A, van Iersel MP, Rodriguez N, Dräger A, Büchel F, Cokelaer T, Kowal B, Wicks B, Gonçalves E, Dorier J, Page M, Monteiro PT, von Kamp A, Xenarios I, de Jong H, Hucka M, Klamt S, Thieffry D, Le Novère N, Saez-Rodriguez J, Helikar T|
|Journal||BMC Syst Biol|
|Keywords||Animals, Cells, Epidermal Growth Factor, Internet, Models, Biological, Programming Languages, Signal Transduction, Tumor Necrosis Factor-alpha|
BACKGROUND: Qualitative frameworks, especially those based on the logical discrete formalism, are increasingly used to model regulatory and signalling networks. A major advantage of these frameworks is that they do not require precise quantitative data, and that they are well-suited for studies of large networks. While numerous groups have developed specific computational tools that provide original methods to analyse qualitative models, a standard format to exchange qualitative models has been missing.
|Alternate Journal||BMC Syst Biol|
|PubMed Central ID||PMC3892043|
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools.